BSRC "Alexander Fleming" Publications

2025 - (4)

George I Gavriilidis, Vasileios Vasileiou, Stella Dimitsaki, Georgios Karakatsoulis, Antonis Giannakakis, Georgios A Pavlopoulos, Fotis Psomopoulos. 2025, "APNet, an explainable sparse deep learning model to discover differentially active drivers of severe COVID-19", Bioinformatics. , 2025 Feb 8:btaf063. doi: 10.1093/bioinformatics/btaf063. Online ahead of print. [PubMed].

Ioannis Mouratidis, Maxwell A Konnaris, Nikol Chantzi, Candace S Y Chan, Michail Patsakis, Kimonas Provatas, Austin Montgomery, Fotis A Baltoumas, Congzhou M Sha, Manvita Mareboina, Georgios A Pavlopoulos, Dionysios V Chartoumpekis, Ilias Georgakopoulos-Soares. 2024, "Identification of the shortest species-specific oligonucleotide sequences", Genome Res., 2025 Jan 31. doi: 10.1101/gr.280070.124. Online ahead of print. [PubMed].

Mathijs P Scholtes, Maryam Akbarzadeh, Alexandros Galaras, J Alberto Nakauma-Gonzáles, Ameneh Bazrafshan, Vandana Solanki, Bram Torenvliet, Leila Beikmohammadi, Valeria Lozovanu, Shahla Romal, Panagiotis Moulos, Nikoleta Vavouraki, Tsung Wai Kan, Mahesh Algoe, Martin E van Royen, Andrea Sacchetti, Thierry P P van den Bosch, Bert Eussen, Annelies de Klein, Geert J L H van Leenders, Joost L Boormans, Pantelis Hatzis, Robert-Jan Palstra, Tahlita C M Zuiverloon, Tokameh Mahmoudi. 2025, "Integrative analysis of patient-derived tumoroids and ex vivo organoid modeling of ARID1A loss in bladder cancer reveals therapeutic molecular targets", Cancer Lett., 2025 Jan 29:217506. doi: 10.1016/j.canlet.2025.217506. Online ahead of print. [PubMed].

Mouratidis I, Konnaris M, Chantzi N, Chan CSY, Patsakis M, Provatas K, Montgomery A, Baltoumas FA, Sha CM, Mareboina M, Pavlopoulos GA, Chartoumpekis DV, Georgakopoulos-Soares I. 2025, "Identification of the shortest species-specific oligonucleotide sequences.", Genome Res., 2025 Jan 2: gr.280070.124. doi: 10.1101/gr.280070.124. Epub ahead of print. [PubMed].