2023 - (65)
2023, "Identifying novel regulatory effects for clinically relevant genes through the study of the Greek population.", BMC Genomics,, 2023, 24(1):442. [PubMed].
2023, "Robust Bioinformatics Approaches Result in the First Polygenic Risk Score for BMI in Greek Adults.", J Pers Med, , 2023, 13(2):327 [PubMed].
2023, "In Vitro Fermentation of Pleurotus eryngii Mushrooms by Human Fecal Microbiota: Metataxonomic Analysis and Metabolomic Profiling of Fermentation Products.", J Fungi (Basel), 2023, 9(1):128 [PubMed].
2023, "Harmonisation of education, training and continuing professional development for laboratory animal caretakers, technicians and technologists: Report of the FELASA-EFAT Working Group.", Lab. Anim., [DOI].
2023, "Editorial: Transcriptional and epigenetic control of T and innate lymphoid cell development and function.", Front Immunol., 2023 May 11; 14:1213831 doi: 10.3389/fimmu.2023.1213831 [PubMed].
2023, "Innate-like T lymphocytes in chronic liver disease.", Front Immunol., 14: 1114605. doi: 10.3389/fimmu.2023.1114605. eCollection 2023 [PubMed].
2023, "UT(se)X differences during immune responses.", Nat Immunology., 2023 Mar 30. doi: 10.1038/s41590-023-01481-6. [PubMed].
2023, "APOBEC3B Is Co-Expressed with PKCα/NF-κB in Oral and Oropharyngeal Squamous Cell Carcinomas", Diagnostics (Basel), 2023 Feb 3; 13(3):569. doi: 10.3390/diagnostics13030569. [PubMed].
2023, "Cortical interneuron specification and diversification in the era of big data.", Curr Opin Neurobiol. , 2023 Jun; 80:102703. doi: 10.1016/j.conb.2023.102703. Epub 2023 Mar 16 [PubMed].
2023, "Rac1 and Rac3 GTPases and TPC2 are required for axonal outgrowth and migration of cortical interneurons.", J. Cell Science, 2023 Mar 15; 136(6):jcs260373. doi: 10.1242/jcs.260373. Epub 2023 Mar 10. [PubMed].
2023, "Editorial: Integrin adhesion receptors in health and disease. Front Cell Dev Biol.", Front Cell Dev Biol. , 2023 Feb 14; 11:1149920. doi: 10.3389/fcell.2023.1149920. [PubMed].
2023, "Cell–Extracellular Matrix Adhesions in Vascular Endothelium.", Biology of Extracellular Matrix, vol 12. Springer, Cham. [DOI].
2023, "The interactome of the UapA transporter reveals putative new players in anterograde membrane cargo trafficking.", Fungal Genet Biol., 2023 Sep 18; 169:103840. doi: 10.1016/j.fgb.2023.103840. Epub ahead of print. [PubMed].
2023, "Transcriptomic and proteomic profiling reveals distinct pathogenic features of peripheral non-classical monocytes in systemic lupus erythematosus.", Clin Immunol., 2023 Oct; 255:109765. doi: 10.1016/j.clim.2023.109765. Epub 2023 Sep 9. [PubMed].
2023, "Endogenous Alpha- Synuclein is Essential for the Transfer of Pathology by Exosome-Enriched Extracellular Vesicles, Following Inoculation with Preformed Fibrils in vivo.", Aging Dis., 2023 Aug 4. doi: 10.14336/AD.2023.0614. Epub ahead of print. [PubMed].
2023, "Transcriptome and proteome analysis reveals the anti-cancer properties of Hypnea musciformis marine macroalga extract in liver and intestinal cancer cells.", Hum Genomics., 2023 Jul 31; 17(1):71. doi: 10.1186/s40246-023-00517-0. [PubMed].
2023, "Substrate Specificity of the Highly Thermostable Esterase EstDZ3.", ChemBioChem., 2023 Mar 1; 24(5):e202200642 [PubMed].
2023, "Cellular complexity and crosstalk in murine TNF-dependent ileitis: Different fibroblast subsets propel spatially defined ileal inflammation through TNFR1 signalling", bioRxiv, 2023.09.29.560107 [doi].
2023, "A Novel human IL-23A Overexpressing Mouse Model of Systemic Lupus Erythematosus", bioRxiv, 2023.11.08.566163 [doi].
2023, "Distinct innate and adaptive immunity phenotypic profile at the circulating single-cell level in Psoriatic Arthritis.", Clin Immunol., 253:109679. [PubMed].
2023, "The long non-coding RNA HOTAIR contributes to joint-specific gene expression in rheumatoid arthritis.", Nat Commun., 14(1):8172. [PubMed].
2023, "Targeting senescence and inflammation in chronic destructive TNF-driven joint pathology.", Mech Ageing Dev., 214:111856. [PubMed].
2023, "Activation and Functions of Col6a1+ Fibroblasts in Colitis-Associated Cancer.", Int J Mol Sci., 25(1):148 [PubMed].
2023, "Puckered and JNK signaling in pioneer neurons coordinates the motor activity of the Drosophila embryo", Nat Commun. , 2023 Dec 11; 14(1):8186. doi: 10.1038/s41467-023-43783-1. [PubMed].
2023, "Proteome Analysis of the ROF-FKBP Mutants Reveals Functional Relations among Heat Stress Responses, Plant Development, and Protein Quality Control during Heat Acclimation in Arabidopsis thaliana. ", ACS Omega., 2023 Dec 26; 9(2):2391-2408. doi: 10.1021/acsomega.3c06773 [PubMed].
2023, "Ferroptosis-protective membrane domains in quiescence.", Cell Rep., 2023 Dec 26; 42(12):113561. doi: 10.1016/j.celrep.2023.113561. Epub 2023 Dec 12. [PubMed].
2023, "A Peripheral Blood Signature of Increased Th1 and Myeloid Cells Combined with Serum Inflammatory Mediators Is Associated with Response to Abatacept in Rheumatoid Arthritis Patients.", Cells., 2023 Dec 9; 12(24):2808. doi: 10.3390/cells12242808. [PubMed].
2023, "Expression of PD-1/PD-L1 axis in mediastinal lymph nodes and lung tissue of human and experimental lung fibrosis indicates a potential therapeutic target for idiopathic pulmonary fibrosis.", Respir Res., 24(1):279. [PubMed].
2023, "3'-tRF-CysGCA overexpression in HEK-293 cells alters the global expression profile and modulates cellular processes and pathways.", Funct Integr Genomics., 2023 Nov 21; 23(4):341. doi: 10.1007/s10142-023-01272-0. [PubMed].
2023, "Data-Independent Acquisition Mass Spectrometry Analysis of FFPE Rectal Cancer Samples Offers In-Depth Proteomics Characterization of the Response to Neoadjuvant Chemoradiotherapy", Int J Mol Sci., 2023 Oct 21;24(20) :15412. doi: 10.3390/ijms242015412. [PubMed].
2023, "Increased Levels of Galectin-3 in Critical COVID-19", Int J Mol Sci., 2023 Oct 31; 24(21):15833. [PubMed].
2023, "Inactivation of Tumor Suppressor CYLD Inhibits Fibroblast Reprogramming to Pluripotency.", Cancers (Basel)., 2023 Oct 15; 15(20):4997. doi: 10.3390/cancers15204997. [PubMed].
2023, "N-(2-Aminophenyl)-benzamide Inhibitors of Class I HDAC Enzymes with Antiproliferative and Antifibrotic Activity.", J Med Chem., 2023 Oct 26; 66(20):14357-14376. [PubMed].
2023, "SCALA: A complete solution for multimodal analysis of single-cell Next Generation Sequencing data", Comput Struct Biotechnol J., 2023 Oct 20 :21:5382-5393. doi: 10.1016/j.csbj.2023.10.032. eCollection 2023. [PubMed].
2023, "Protocol for assessing translation in living Drosophila imaginal discs by O-propargyl-puromycin incorporation", STAR Protoc., 2023 Oct 19; 4(4):102653. doi: 10.1016/j.xpro.2023.102653. Online ahead of print. [PubMed].
2023, "SCALA: A complete solution for multimodal analysis of single-cell Next Generation Sequencing data", Computational and Structural Biotechnology Journal, October 20. ISSN 2001-0370, [doi], [ARTICLE].
2023, "Unraveling the functional dark matter through global metagenomics", Nature, October 11. doi: 10.1038/s41586-023-06583-7 [Nature], [PubMed].
2023, "NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes", Nucleic Acids Res., 2023 Oct 9: gkad800. doi: 10.1093/nar/gkad800. Online ahead of print. [PubMed].
2023, "SRC and TKS5 mediated podosome formation in fibroblasts promotes extracellular matrix invasion and pulmonary fibrosis", Nat Commun., 2023 Sep 21; 14(1):5882. [PubMed].
2023, "Increased lipocalin-2 expression in pulmonary inflammation and fibrosis.", Front Med., 2023 Sep 7; 10:1195501. [PubMed].
2023, "IQGAP1 mediates the communication between the nucleus and the mitochondria via NDUFS4 alternative splicing", NAR Cancer., 2023 Aug 24; 5(3):zcad046. [PubMed], [DOI].
2023, "Growth deregulation and interaction with host hemocytes contribute to tumor progression in a Drosophila brain tumor model.", Proc Natl Acad Sci U S A., 2023 Aug 15; 120(33). [PubMed].
2023, "Flame (v2.0): advanced integration and interpretation of functional enrichment results from multiple sources.", Bioinformatics., 2023 Aug 4 :btad490. doi: 10.1093/bioinformatics/btad490 [PubMed].
2023, "Enhanced frequency of transcription pre-initiation complexes assembly after exposure to UV irradiation results in increased repair activity and reduced probabilities for mutagenesis", Nucleic Acids Research, gkad593 [doi].
2023, "Ribosomal protein mutations and cell competition: autonomous and nonautonomous effects on a stress response", Genetics., 2023 Jul 6; 224(3):iyad080. doi: 10.1093/genetics/iyad080. [PubMed].
2023, "Differential intracellular trafficking of extracellular vesicles in microglia and astrocytes. ", Cell Mol Life Sci., 2023 Jun 30; 80(7):193. doi: 10.1007/s00018-023-04841-5. [PubMed].
2023, "Arena3Dweb: Interactive 3D visualization of multilayered networks supporting multiple directional information channels, clustering analysis and application integration", NAR Genomics and Bioinformatics, Volume 5, Issue 2, June 2023, lqad053 [doi], [PubMed].
2023, "Distinct modulation of cellular immunopeptidome by the allosteric regulatory site of ER aminopeptidase 1", Eur J Immunol. , 2023 Aug; 53(8):e2350449. doi: 10.1002/eji.202350449. Epub 2023 May 15. [PubMed].
2023, "The Role of Autotaxin and LPA Signaling in Embryonic Development, Pathophysiology and Cancer.", Int J Mol Sci., May 5; 24(9):8325. [PubMed].
2023, "Human Tau Aggregates Are Permissive to Protein Synthesis-Dependent Memory in Drosophila Tauopathy Models", J Neurosci., 2023 Apr 19; 43(16):2988-3006. doi: 10.1523/JNEUROSCI.1374-22.2023. Epub 2023 Mar 3. [PubMed].
2023, "Repurposing antipsychotic drug Amisulpride for targeting synovial fibroblast activation in arthritis", JCI insight, 2023 Apr 4; e165024 [PubMed].
2023, "Salivary gland epithelial cell in Sjögren's syndrome: Metabolic shift and altered mitochondrial morphology toward an innate immune cell function. ", J Autoimmun. , 2023 Apr ;136:103014. doi: 10.1016/j.jaut.2023.103014. Epub 2023 Mar 8. [PubMed].
2023, "Disclosing the molecular basis of salinity priming in olive trees using proteogenomic model discovery.", Plant Physiol., 2023 Mar 17; 191(3):1913-1933. doi: 10.1093/plphys/kiac572. [PubMed].
2023, "Integrated omics analysis for characterization of the contribution of high fructose corn syrup to non-alcoholic fatty liver disease in obesity.", Metabolism., 2023 Mar 28: 155552. doi: 10.1016/j.metabol.2023.155552. Online ahead of print. [PubMed].
2023, "n explainable machine learning-driven proposal of pulmonary fibrosis biomarkers.", Comput Struct Biotechnol J., 2023; 21:2305-2315 [PubMed].
2023, "SH2 Domain-Containing Phosphatase-SHP2 Attenuates Fibrotic Responses through Negative Regulation of Mitochondrial Metabolism in Lung Fibroblasts.", Diagnostics 2023, 13 (6), 1166. [PubMed].
2023, ""Hit" to lead optimization and chemoinformatic studies for a new series of Autotaxin inhibitors.", Eur J Med Chem., 2023 Mar 5; 249:115130. [PubMed].
2023, "Phosphotungstic acid-enhanced microcomputed tomography for quantitative visualization of mouse mammary gland morphology.", Journal of Medical Imaging, 10 (Suppl 2): S22402. doi: 10.1117/1.JMI.10.S2.S22402 [PubMed].
2023, "Exploring microbial functional biodiversity at the protein family level - from metagenomic sequence reads to annotated protein clusters", Frontiers in Bioinformatics, 03 March 2023, Volume 3 -2023, [doi], [LINK], [PubMed].
2023, "A novel isolation method for spontaneously released extracellular vesicles from brain tissue and its implications for stress-driven brain pathology.", Cell Commun Signal., 2023 Feb 13; 21(1):35. doi: 10.1186/s12964-023-01045-z. [PubMed].
2023, "JNK signaling in pioneer neurons organizes ventral nerve cord architecture in Drosophila embryos", Nat Commun., 2023 Feb 7; 14(1):675. doi: 10.1038/s41467-023-36388-1. [PubMed].
2023, "Ageotypes revisited: The brain and central nervous system dysfunction as a major nutritional and lifestyle target for healthy aging.", Maturitas., 2023 Feb 6; 170:51-57. doi: 10.1016/j.maturitas.2023.01.013. [PubMed].
2023, "Endothelial Specific Deletion of Autotaxin Improves Stroke Outcomes.", Cells., 2023 Feb 3; 12(3):511. [PubMed].
2023, "A wide foodomics approach coupled with metagenomics elucidates the environmental signature of potatoes.", iScience., 2023 Jan 5; 26(1):105917. doi: 10.1016/j.isci.2022.105917. eCollection 2023 Jan 20. [PubMed].
2023, "Histone H2Bub dynamics in the 5' region of active genes are tightly linked to the UV-induced transcriptional response.", Computational and Structural Biotechnology Journal, 21: 614-629. doi.org/10.1016/j.csbj.2022.12.013 [Link].